Why do components, parts, pieces and mechanical structures sound different from each other?
It's because of the "Vibratory Code" they develop as atoms intermingle. We look at frequency values, but there are deeper involvement levels to look at than just the outcome value. We should also be looking at value changes that take place constantly in our systems because of conditions, environment and movement. The way your system is charged and active, both electrically and mechanically, makes up the sound you get. Which one is bigger, electrical or mechanical? They are one in the same and can not be separated from each others existence, but instead depend on each other.
Energies intermingle
As we are listening to our systems we are thinking of an audio chain that runs from one end to the other carrying the audio signal. What we are not thinking about are the atoms interactions while this is going on. As you have discovered changing anything mechanically anywhere along the audio signals pathway major changes happen to the sound. What are these changes? It's reconstructing the pathway, as if you were deciding between taking the Turnpike or the side roads. The audio signal/path is not this magical language that just appears and makes sense, it's an active process of mechanical and electrical design. When we see our systems as full of energy and conduits we can start to feel more comfortable in making sonic changes by using the energies themselves as part of the system. It would be a good thing to learn more about the parts that host and pass energy from the smallest to the biggest of values.
lets go a little deeper
Energy level
A quantum mechanical system or particle that is bound -- that is, confined spatially can only take on certain discrete values of energy. This contrasts with classical particles, which can have any energy. These discrete values are called energy levels. The term is commonly used for the energy levels of electrons in atoms or molecules, which are bound by the electric field of the nucleus, but can also refer to energy levels of nuclei, vibrational, rotational energy levels in molecules. The energy spectrum of a system with such discrete energy levels is said to be quantized (spherically harmonized).
If the potential energy is set to zero at infinite distance from the atomic nucleus or molecule, the usual convention, then bound electron states have negative potential energy.
If more than one quantum mechanical state is at the same energy, the energy levels are " degenerate ". They are then called degenerate energy levels. In quantum theory this usually pertains to electronic configurations and the electron's energy levels, where different possible occupation states for particles may be related by symmetry.
Explanation
Quantized energy levels result from the relation between a particle's energy and its wavelength. For a confined particle such as an electron in an atom, the wave function has the form of standing waves. Only stationary states with energies corresponding to integral numbers of wavelengths can exist; for other states the waves interfere destructively, resulting in zero probability density. Yes, standing waves happen on a molecular levels as well. This explains distortion from dampening and over mass proportions.
Molecules
Chemical bonds between atoms in a molecule form because they make the situation more stable for the involved atoms, which generally means the sum energy level for the involved atoms in the molecule is lower than if the atoms were not so bonded. As separate atoms approach each other to covalently bond, their orbitals affect each others energy levels to form bonding and anti-bonding molecular orbitals. The energy level of the bonding orbitals is lower, and the energy level of the anti-bonding orbitals is higher. For the bond in the molecule to be stable, the covalent bonding electrons occupy the lower energy bonding orbital. One becomes part of the other (signal path wise) as connections or expansion of the conduit.
A chemical bond is an attraction between atoms that allows the formation of chemical substances that contain two or more atoms. The bond is caused by the electromagnetic force attraction between opposite charges, either between electrons and nuclei, or as the result of a dipole attraction. The strength of chemical bonds varies considerably; there are "strong bonds" such as covalent or ionic bonds and "weak bonds" such as dipole-dipole interactions, the London dispersion force and hydrogen bonding.
Since opposite charges attract via a simple electromagnetic force, the negatively charged electrons orbiting the nucleus and the positively charged protons in the nucleus attract each other. Also, an electron positioned between two nuclei will be attracted to both of them. Thus, the most stable configuration of nuclei and electrons is one in which the electrons spend more time between nuclei, than anywhere else in space. These electrons cause the nuclei to be attracted to each other, and this attraction results in the bond. However, this assembly cannot collapse to a size dictated by the volumes of these individual particles. Due to the matter wave nature of electrons and their smaller mass, they occupy a much larger amount of volume compared with the nuclei, and this volume occupied by the electrons keeps the atomic nuclei relatively far apart, as compared with the size of the nuclei themselves.
In general, strong chemical bonding is associated with the sharing or transfer of electrons between the participating atoms. The atoms in molecules, crystals, metals and diatomic gases— indeed most of the physical environment around us— are held together by chemical bonds, which dictate the structure of matter.
Energy level transitions
Electrons in atoms and molecules can change (make transitions in) energy levels by emitting or absorbing a photon (of electromagnetic radiation) whose energy must be exactly equal to the energy difference between the two levels. Electrons can also be completely removed from a chemical species such as an atom, molecule, or ion. Energy in corresponding opposite quantities can also be released, often in the form of photon energy, when electrons are added to positively-charged ions or sometimes atoms. Molecules can also undergo transitions in their vibrational or rotational energy levels. Energy level transitions can also be non-radiative, meaning emission or absorption of a photon is not involved.
If an atom, ion, or molecule is at the lowest possible energy level, it and its electrons are said to be in the ground state. If it is at a higher energy level, it is said to be excited, or any electrons that have higher energy than the ground state are excited. Such a species can be excited to a higher energy level by absorbing a photon whose energy is equal to the energy difference between the levels. Conversely, an excited species can go to a lower energy level by spontaneously emitting a photon equal to the energy difference. A photon's energy is equal to Planck's constant times its frequency and thus is proportional to its frequency, or inversely to its wavelength.
A transition in an energy level of an electron in a molecule may be combined with a vibrational transition and called a vibronic transition. A vibrational and rotational transition may be combined by rovibrational coupling. In rovibronic coupling, electron transitions are simultaneously combined with both vibrational and rotational transitions. Photons involved in transitions may have energy of various ranges in the electromagnetic spectrum, such as X-ray, ultraviolet, visible light, infrared, microwave radiation, or lower depending on the type of transition. In a very general way, energy level electronic states and vibrational levels can be overlap. Translational energy levels are practically continuous and can be calculated as kinetic energy using classical mechanics. On a bigger scale we can see why the dissipation rates of vibrations should not be dampened before reaching a secure harmonic balance.
Higher temperature causes fluid atoms and molecules to move faster increasing their translational energy and can thermally excite (nonradiatively) polyatomic molecules to a higher average distribution of vibrational and rotational energy levels. This means as temperature rises, translational, vibrational, and rotational contributions to molecular heat capacity let molecules absorb heat and hold more internal energy. Conduction of heat typically occurs as molecules or atoms collide transferring the heat between each other. At even higher temperatures, electrons can be thermally excited to higher energy orbitals in atoms or molecules.
The Vibratory Code is energy at work in audio's mechanical parts. You might even call it a variable constant. On one hand the parts are the same as we know them from our view down, but from an atom up these parts are needing to be tuned to prevent distortion of any language (signal) passing through it. Distortion is the plus or minus of any signal that is done without a faithful harmonic structure. In other words being in tune.